CDS
| Accession Number | TCMCG015C50587 |
| gbkey | CDS |
| Protein Id | XP_027084501.1 |
| Location | complement(join(7397095..7397291,7397359..7398427,7398521..7398664,7399131..7399208,7400525..7400641,7400750..7400806,7402525..7402656,7402759..7402956,7405027..7405137,7405243..7405458,7407273..7407458,7409040..7409606)) |
| Gene | LOC113706739 |
| GeneID | 113706739 |
| Organism | Coffea arabica |
Protein
| Length | 1023aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA506972 |
| db_source | XM_027228700.1 |
| Definition | AP-4 complex subunit epsilon-like isoform X1 [Coffea arabica] |
EGGNOG-MAPPER Annotation
| COG_category | U |
| Description | Adaptin N terminal region |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12400
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04142
[VIEW IN KEGG] map04142 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005829 [VIEW IN EMBL-EBI] GO:0005911 [VIEW IN EMBL-EBI] GO:0009506 [VIEW IN EMBL-EBI] GO:0016020 [VIEW IN EMBL-EBI] GO:0030054 [VIEW IN EMBL-EBI] GO:0030117 [VIEW IN EMBL-EBI] GO:0030119 [VIEW IN EMBL-EBI] GO:0030124 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044425 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0048475 [VIEW IN EMBL-EBI] GO:0055044 [VIEW IN EMBL-EBI] GO:0098796 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGCTCCCAAGGAGGATTCGGGCAATCGAAGGAGTTTCTTGACCTAATTAAATCGATTGGAGAAGCTCGATCCAAGGCAGAAGAGGATAGGATCGTTCTTCATGAAATTGAGACGCTGAAACGGAGAATTACGGAGCCGGACATTCCGAAGAGGAAGATGAAGGAGTATATTATAAGGCTTGTTTATGTTGAGATGCTTGGGCACGATGCTTCTTTTGGGTATATTCATGCGGTGAAGATGACTCATGATGATAATATTCATCTGAAGAGGACTGGGTATTTGGCGGTGACGCTGTTTCTAAATGAGGATCATGATTTGATTATTTTGATTGTGAATACTATACAGAAGGACTTGAAATCGGATAACTATTTGGTGGTTTGTGCGGCTTTGAATGTGGTTTGTAAGTTGATTAATGAGGAGACTATTCCAGCTGTGCTGCCGCAGGTTGTGGAGTTGTTGGGGCATCAGAAAGAAGCTGTCAGGAAGAAGGCTGTTATGGCATTACACCGTTTTTATCAGCGCGCTCCCTCTTCTGTCAATCATCTCATATCTAATTTCAGAAAGAAGCTATGTGATAATGATCCTGGAGTTATGGGTGCAACTCTTTGCCCTCTCTATGATCTAATAACAATTGATGTTAATGCCTACAAGGATTTAGTGGCCAGTTTTGCGAGTATTCTTAAACAAGTAGCTGAACGTCGACTGCCAAAAAGTTATGATTACCATCAGATGCCAGCTCCTTTTATTCAGATCAAACTATTGAAGATACTAGCTTTACTGGGTAGTGGTGACAAGAAGGCCAGTGAGCAAATGTATACTATCATAGGTGACATAATGAGAAAGTGTGATTCAACAAGTAATATAGGAAATGCTGTTCTTTATGAGTGCATATGCTGTATTTCTTCCATACATCCAAACCCCAAACTTCTAGAATCTGCAGCTGATGCTATTGCCAAGTTTTTGAAGAGTGATAGTCACAACCTGAAATATCTGGGCATTGATGCTCTTGGTAGATTGATAAAGTTAAGTCCAGAAATTGCTGAACAACACCAACTTGCTGTCATCGATTGTTTAGAGGACCCTGATGATACCCTTAAGCGGAAGACGTTTGAGCTGCTATATAAAATGACAAAATCTTCAAATGTGGAAGTGATTGTGGACCGTATGATTGATTACATGATAAACATCAATGATAGCCATTATAAGACTGAAATTGCATCCAGATGCGTTGAACTTGCTGAGCAATTTGCACCAAGCAACCAGTGGTTTATCCAGACAATGAATAGAGTCTTTGAACATGCTGGTGATCTAGTAAACCCTAAAGTGGCTCATAATTTGATGCGCTTGATTGCTGAGGGTTTCGGTGAGGAAGATGATACTGCAGATAGTCAGTTGAGATCCTCCGCAGTAGAATCATATCTGCGCATTGTTGTGGAGCCAAAGCTTCCTTCAACATTTCTCCAAGTCATTTGTTGGGTTTTGGGGGAATATGGAACTGCAGATGGAAAGTATTCTGCCTCCTATATAACTGGTAAATTATGTGATGTGGCTGAGGCATACTCAACTGATGACACCGTCAAGGCATATGCAATATCTGCATTGATGAAAATATACTCATTCGAAATAGCAGCTGGGAGAAAAGTGGACGTGCTTCCTGAGTGCCAGTCCTTCATTGAAGAACTACTAGCATCCCACTCAACGGACCTCCAGCAGCGTGCTTATGAACTTCAAGCAATCCTTGGTTTAGATGCTAATGTGGCTACCAACATCATGCCAATGGATGCAAGTTGTGAAGACATCGAGATTGATAGAAGCCTTTCGTTTCTCAACAGTTATGTTCAGCAGTCAATAGAAAAGGGGGCCCAGCCTTATATTCCTGAAGGTGAACGGTCTGGAATGACAGATGTCAGCAGTTTCAGAAGCCAAGAACTGCATGAGGTCTCATCACATGCCCTTAGGTTTGAGGCATATGAGCTTCCTAAACCAGTGATGCCATCCAGAGTTTCTCCGATTGAGCAATCATCATCAAATGAACTTGTACCTGCACCTGAGCCATCTTATCATGCAGAGATGCACCAGGTCGCTTCGTCTGTGCCATCTGTTTCTGACACTGGGTCATTAGAACTAAAGCTAAAACTTGATGGGGTCCAACGGAAGTGGGGTAGGCCAACTTACTCTTCTGCTGCACCATCTACTTCAAATGCTGATATCCCTAAGATTCAAAATGGAGCTCCTCAGCTTGATGCGGTTAGTAGTTCAAGCTCAAAAGCTGTGTCTTATGATTCAAGGAGGCAGCAAGTAGAAATATCTGCTGAAAAGCAAAAACTTGCTGCTTCACTTTTTGGTGGTACATCAAAGTCCCACAAAAGACAATCTTCTGGCAGCCAGAAGGTTCCAAAGACTAACATTCCTGCTGCAGAAAAATCTCATGTGGCTAAGAATGCAACTTCAGACACTGCTGTGTTAGAGAGAACTCCCCAGCCGCCTCCAGACTTGCTTGATTTGGATGAATCCACTGTTTCTAGTAGTGCACAATCTTTGGATCCTTTCAAGCAATTGGAAGGTCTCCTTGACCTAAACCAAGACACTTCAACTTTGACTACTAGTGATGCTAGTGCAAGCGGAGCACCAGATGTTATGTCTTTATATGGGGAAACAACCCTGAATGTGCAAAGTGGTGGTGTTCCAAACCTACTTCCTGCCGGTAGAGATGAGGCCAATCTCCTTTCTGGACTTGCAGGTACGCCTAACAGAGATGGTCATGGAGAAAATACGGTTACAAACCCAACTCAGCAATTAAACAAGGGACCTAATGCTAAAGAATCACTGGAGAAGGATGCGCTGGTCAGGCAACTAGGTGTAACACCAACAGCATGTATCATTGTTCTTCGAGAACAATTGTTGTATGATTACGGCTTTGGATCTCCATGCGGTTGGGCTAATCTACGGGGATCTCAAATAACGTGCCGAATCTGTTGGGCTTCTACACTGGAGTGGGTCAAAGGCCTGCGGGGAATAAAACTGGATATAGTCGGTGTATCAACCACAGGAGCAGTAGAGCTTTTGTAG |
| Protein: MGSQGGFGQSKEFLDLIKSIGEARSKAEEDRIVLHEIETLKRRITEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNIHLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLVVCAALNVVCKLINEETIPAVLPQVVELLGHQKEAVRKKAVMALHRFYQRAPSSVNHLISNFRKKLCDNDPGVMGATLCPLYDLITIDVNAYKDLVASFASILKQVAERRLPKSYDYHQMPAPFIQIKLLKILALLGSGDKKASEQMYTIIGDIMRKCDSTSNIGNAVLYECICCISSIHPNPKLLESAADAIAKFLKSDSHNLKYLGIDALGRLIKLSPEIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMININDSHYKTEIASRCVELAEQFAPSNQWFIQTMNRVFEHAGDLVNPKVAHNLMRLIAEGFGEEDDTADSQLRSSAVESYLRIVVEPKLPSTFLQVICWVLGEYGTADGKYSASYITGKLCDVAEAYSTDDTVKAYAISALMKIYSFEIAAGRKVDVLPECQSFIEELLASHSTDLQQRAYELQAILGLDANVATNIMPMDASCEDIEIDRSLSFLNSYVQQSIEKGAQPYIPEGERSGMTDVSSFRSQELHEVSSHALRFEAYELPKPVMPSRVSPIEQSSSNELVPAPEPSYHAEMHQVASSVPSVSDTGSLELKLKLDGVQRKWGRPTYSSAAPSTSNADIPKIQNGAPQLDAVSSSSSKAVSYDSRRQQVEISAEKQKLAASLFGGTSKSHKRQSSGSQKVPKTNIPAAEKSHVAKNATSDTAVLERTPQPPPDLLDLDESTVSSSAQSLDPFKQLEGLLDLNQDTSTLTTSDASASGAPDVMSLYGETTLNVQSGGVPNLLPAGRDEANLLSGLAGTPNRDGHGENTVTNPTQQLNKGPNAKESLEKDALVRQLGVTPTACIIVLREQLLYDYGFGSPCGWANLRGSQITCRICWASTLEWVKGLRGIKLDIVGVSTTGAVELL |